Miyakogusa Predicted Gene

Lj4g3v2882120.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL C0JP26_LOTJA 409 76.8 77.2 (tr|C0JP26) Putative basic helix-loop-helix protein BHLH8 OS=Lotus japonicus PE=4 SV=1
TAIR_pep AT5G50915.2 160 76.3 87.6 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr5:20710764-20712252 REVERSE LENGTH=286
Medicago Medtr8g099880.1 304 52.5 59.7 | basic helix loop helix protein BHLH8 | HC | chr8:40310788-40313947 | 20130731
Soybean Glyma05g38450.1 299 52.5 59.3  
LJGI gnl|LJGI|AV424133 206 86.9 86.9 similar to UniRef100_A8TLW5 Cluster: BHLH transcription factor Upa20; n=1; Capsicum annuum|Rep: BHLH transcription factor Upa20 - Capsicum annuum (Bell pepper), partial (19%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2882120.1 length: 327 aa.
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
method AccNumber shortName E-value location
Molecular Function GO:0046983 protein dimerization activity    
Gene3D G3DSA:4.10.280.10 no description 3e-16 147-212
HMMPfam PF00010 HLH 8.9e-08 151-198
HMMSmart SM00353 helix 3.5e-10 153-203
ProfileScan PS50888 BHLH 15.580 147-197
superfamily SSF47459 HLH, 3e-16 145-230
no_ID  
HMMPanther PTHR12565 STEROL 1.6e-52 43-217
HMMPanther PTHR12565:SF7 BASIC 1.6e-52 43-217
Seg seg seg NA 43-54
98-133
239-253
Wolf-PSORT
Lj4g3v2882120.1	nucl 13.5, cyto_nucl 7.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2882120.1