Miyakogusa Predicted Gene
- Lj4g3v2871740.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7KRC1_SOYBN |
332 |
81.3 |
87.2 |
(tr|K7KRC1) Uncharacterized protein (Fragment) OS=Glycine max PE=3 SV=1 |
| TAIR_pep |
AT5G13420.1 |
291 |
68.4 |
82.3 |
| Symbols: | Aldolase-type TIM barrel family protein | chr5:4302080-4304212 REVERSE LENGTH=438 |
| Medicago |
Medtr8g096130.1 |
333 |
83.9 |
87.9 |
| transaldolase family protein | HC | chr8:40093835-40090428 | 20130731 |
| Soybean |
Glyma05g33410.1 |
329 |
83.3 |
89.6 |
|
| LJGI |
gnl|LJGI|TC64761 |
1207 |
99.8 |
99.8 |
similar to UniRef100_A7QT89 Cluster: Chromosome chr1 scaffold_166, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_166, whole genome shotgun sequence - Vitis vinifera (Grape), partial (44%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v2871740.1 |
length: 363 aa. |
| IPR001585 |
Transaldolase |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0005975 |
carbohydrate metabolic process |
|
|
| HMMPanther |
PTHR10683 |
TRANSALDOLASE |
3e-40 |
91-279 |
| HMMPfam |
PF00923 |
Transaldolase |
3.2e-44 |
134-290 |
| IPR004732 |
Transaldolase type 2 |
| Molecular Function |
GO:0004801 |
sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity |
|
|
| Cellular Component |
GO:0005737 |
cytoplasm |
|
|
| Biological Process |
GO:0006098 |
pentose-phosphate shunt |
|
|
| HAMAP |
MF_00493 |
Transaldolase_2 |
50.405 |
107-285 |
| IPR013785 |
Aldolase-type TIM barrel |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Gene3D |
G3DSA:3.20.20.70 |
no description |
4.3e-57 |
108-284 |
| IPR018225 |
Transaldolase, active site |
| Biological Process |
GO:0005975 |
carbohydrate metabolic process |
|
|
| PatternScan |
PS01054 |
TRANSALDOLASE_1 |
NA |
140-148 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
336-360 |
| superfamily |
SSF51569 |
Aldolase |
4.9e-41 |
111-278 |
- Wolf-PSORT
Lj4g3v2871740.1 chlo 7.5, chlo_mito 4.5, nucl 1, cyto 1, plas 1, extr 1, vacu 1, E.R. 1, cyto_nucl 1, nucl_plas 1, E.R._vacu 1, E.R._plas 1, cyto_E.R. 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v2871740.1 |
|