Miyakogusa Predicted Gene

Lj4g3v2860600.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7LGI2_MEDTR 1149 72.5 80.4 (tr|G7LGI2) Tyrosyl-DNA phosphodiesterase OS=Medicago truncatula GN=MTR_8g095490 PE=4 SV=1
TAIR_pep AT5G07400.1 766 57.4 70.8 | Symbols: | forkhead-associated domain-containing protein / FHA domain-containing protein | chr5:2340814-2345321 FORWARD LENGTH=1084
Medicago Medtr8g095490.1 1149 72.5 80.4 | tyrosyl-DNA phosphodiesterase | HC | chr8:39969676-39961395 | 20130731
Soybean Glyma08g00870.1 1107 69.0 74.5  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2860600.2 length: 770 aa.
IPR010347 Tyrosyl-DNA phosphodiesterase
method AccNumber shortName E-value location
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006281 DNA repair    
Molecular Function GO:0008081 phosphoric diester hydrolase activity    
HMMPanther PTHR12415 TYROSYL-DNA 4.3e-91 62-748
HMMPfam PF06087 Tyr-DNA_phospho 2.7e-21 80-288
462-697
IPR014905 HIP116, Rad5p N-terminal
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0008270 zinc ion binding    
Molecular Function GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides    
HMMPfam PF08797 HIRAN 5e-19 305-418
HMMSmart SM00910 no description 0.00028 305-430
IPR027415 Tyrosyl-DNA phosphodiesterase C-terminal domain
Gene3D G3DSA:3.30.870.20 no description 5.3e-63 455-718
no_ID  
Coil coil coiled-coil NA 702-754
Gene3D G3DSA:3.30.870.10 no description 4.8e-44 57-276
Seg seg seg NA 73-85
305-316
715-742
748-753
superfamily SSF56024 Phospholipase 2.4e-34 453-724
42-276
Wolf-PSORT
Lj4g3v2860600.2	nucl 3, cyto 3, E.R. 3, cyto_nucl 3, cyto_E.R. 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2860600.2