Miyakogusa Predicted Gene

Lj4g3v2829990.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MVR5_SOYBN 917 72.8 83.5 (tr|I1MVR5) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT4G37380.1 706 54.5 75.2 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:17572040-17573938 REVERSE LENGTH=632
Medicago Medtr4g095065.1 947 75.3 85.8 | pentatricopeptide (PPR) repeat protein | HC | chr4:39629093-39627012 | 20130731
Soybean Glyma17g18130.1 883 74.2 85.4  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2829990.1 length: 619 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.093 152-177
180-207
286-312
387-412
HMMPfam PF13041 PPR_2 3.6e-12 211-257
312-358
HMMTigr TIGR00756 PPR: 0.0013 153-179
181-207
213-247
286-314
314-347
349-382
ProfileScan PS51375 PPR 7.454 211-245
178-208
147-177
312-346
281-311
347-377
383-413
449-483
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 7.5e-05 281-350
no_ID  
HMMPanther PTHR24015 FAMILY 2.8e-294 22-619
HMMPanther PTHR24015:SF109SUBFAMILY NOT 2.8e-294 22-619
HMMPfam PF14432 DYW_deaminase 6.3e-16 495-609
Seg seg seg NA 5-20
35-46
Wolf-PSORT
Lj4g3v2829990.1	chlo 11, nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2829990.1