Miyakogusa Predicted Gene

Lj4g3v2825680.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7L475_SOYBN 1286 63.0 69.9 (tr|K7L475) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G63950.1 984 67.8 79.8 | Symbols: CHR24 | chromatin remodeling 24 | chr5:25592160-25598405 REVERSE LENGTH=1090
Medicago Medtr8g094070.1 1198 67.6 74.6 | chromatin-remodeling complex ATPase chain | HC | chr8:39349649-39359572 | 20130731
Soybean Glyma08g00400.1 1180 68.2 75.2  
LJGI gnl|LJGI|FS358209 797 100.0 100.0 weakly similar to UniRef100_A7QST1 Cluster: Chromosome chr4 scaffold_162, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_162, whole genome shotgun sequence - Vitis vinifera (Grape), partial (13%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2825680.1 length: 1072 aa.
IPR000330 SNF2-related
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00176 SNF2_N 3.8e-60 393-693
IPR001650 Helicase, C-terminal
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0004386 helicase activity    
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00271 Helicase_C 6.5e-13 781-858
HMMSmart SM00490 helicase 1.8e-20 775-858
ProfileScan PS51194 HELICASE_CTER 16.001 749-908
IPR014001 Helicase, superfamily 1/2, ATP-binding domain
HMMSmart SM00487 DEAD-like 1.2e-25 385-587
ProfileScan PS51192 HELICASE_ATP_BIND_1 19.179 402-576
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 4.5e-58 379-626
517-918
no_ID  
Gene3D G3DSA:3.40.50.300 no description 5.5e-22 388-573
741-885
HMMPanther PTHR10799 SWI/SNF-RELATED 0 145-1060
HMMPanther PTHR10799:SF257SUBFAMILY NOT 0 145-1060
Seg seg seg NA 33-46
47-58
78-90
111-133
239-250
287-298
323-334
337-356
817-830
1012-1029
Wolf-PSORT
Lj4g3v2825680.1	nucl 5, plas 3, cysk_nucl 3, chlo 2, cyto 2, cysk_plas 2, mito_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2825680.1