Miyakogusa Predicted Gene

Lj4g3v2825520.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1K511_SOYBN 295 72.0 78.0 (tr|I1K511) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT2G13570.1 219 62.5 70.7 | Symbols: NF-YB7 | nuclear factor Y, subunit B7 | chr2:5655842-5656489 REVERSE LENGTH=215
Medicago Medtr8g093920.1 286 69.5 78.0 | nuclear transcription factor Y protein | HC | chr8:39304360-39305004 | 20130731
Soybean Glyma05g32680.1 275 71.0 77.1  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2825520.1 length: 217 aa.
IPR003956 Transcription factor, NFYB/HAP3, conserved site
method AccNumber shortName E-value location
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
PatternScan PS00685 NFYB_HAP3 NA 72-88
IPR003957 Transcription factor, CBFA/NFYB, DNA topoisomerase
Molecular Function GO:0003677 DNA binding    
FPrintScan PR00615 CCAATSUBUNTA 1.2e-19 69-87
88-106
107-125
HMMPanther PTHR11064:SF9 CCAAT-BINDING 2.3e-80 20-161
IPR003958 Transcription factor CBF/NF-Y/archaeal histone
Cellular Component GO:0005622 intracellular    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMPfam PF00808 CBFD_NFYB_HMF 8.2e-28 41-105
IPR009072 Histone-fold
Molecular Function GO:0046982 protein heterodimerization activity    
Gene3D G3DSA:1.10.20.10 no description 1.5e-53 30-158
superfamily SSF47113 Histone-fold 7e-38 38-173
no_ID  
HMMPanther PTHR11064 CCAAT-BINDING 2.3e-80 20-161
Seg seg seg NA 137-156
Wolf-PSORT
Lj4g3v2825520.1	nucl 8, cyto 3, chlo 1, plas 1, pero 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2825520.1