Miyakogusa Predicted Gene
- Lj4g3v2820110.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
D3YBG4_TRIRP |
609 |
90.5 |
96.5 |
(tr|D3YBG4) Bristled-like protein OS=Trifolium repens PE=4 SV=1 |
| TAIR_pep |
AT5G65090.2 |
456 |
68.5 |
82.8 |
| Symbols: MRH3, BST1, DER4 | DNAse I-like superfamily protein | chr5:26004837-26006656 FORWARD LENGTH=466 |
| Medicago |
Medtr8g091360.1 |
599 |
88.9 |
95.6 |
| inositol polyphosphate 5-phosphatase I | HC | chr8:38057021-38053787 | 20130731 |
| Soybean |
Glyma08g14640.1 |
594 |
88.0 |
94.6 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v2820110.1 |
length: 316 aa. |
| IPR000300 |
Inositol polyphosphate-related phosphatase |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0046856 |
phosphatidylinositol dephosphorylation |
|
|
| HMMSmart |
SM00128 |
Inositol |
1.5e-52 |
9-285 |
| IPR005135 |
Endonuclease/exonuclease/phosphatase |
| Gene3D |
G3DSA:3.60.10.10 |
no description |
1.1e-88 |
43-289 |
| HMMPfam |
PF03372 |
Exo_endo_phos |
5.3e-25 |
49-270 |
| superfamily |
SSF56219 |
DNase |
1.8e-56 |
24-283 |
| no_ID |
|
| HMMPanther |
PTHR11200 |
INOSITOL |
2.7e-136 |
29-307 |
| HMMPanther |
PTHR11200:SF29 |
TYPE |
2.7e-136 |
29-307 |
- Wolf-PSORT
Lj4g3v2820110.1 nucl 10, cyto 2, mito 1, golg_plas 1, cyto_pero 1, cyto_E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v2820110.1 |
|