Miyakogusa Predicted Gene

Lj4g3v2800560.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1K4P1_SOYBN 721 81.7 89.3 (tr|I1K4P1) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT4G39620.1 609 67.9 82.3 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:18395294-18397578 FORWARD LENGTH=563
Medicago Medtr8g091670.1 703 81.4 86.6 | PPR containing plant-like protein | HC | chr8:38255046-38248553 | 20130731
Soybean Glyma05g31640.1 715 82.1 89.6  
LJGI gnl|LJGI|FS338895 1481 99.9 99.9 similar to UniRef100_A7PL34 Cluster: Chromosome chr7 scaffold_20, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_20, whole genome shotgun sequence - Vitis vinifera (Grape), partial (40%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2800560.1 length: 442 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.00074 265-293
301-329
371-396
HMMPfam PF13041 PPR_2 1.6e-12 122-163
192-239
HMMPfam PF13812 PPR_3 0.0065 405-437
HMMTigr TIGR00756 PPR: 7.1e-05 121-154
195-228
230-263
265-298
301-333
ProfileScan PS51375 PPR 8.977 118-152
193-227
153-187
228-262
263-297
298-332
368-402
333-367
403-437
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 0.00016 368-398
no_ID  
HMMPanther PTHR24015 FAMILY 1.7e-92 1-442
HMMPanther PTHR24015:SF0 SUBFAMILY 1.7e-92 1-442
Seg seg seg NA 2-15
420-433
Wolf-PSORT
Lj4g3v2800560.1	chlo 9.5, chlo_mito 6.5, mito 2.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2800560.1