Miyakogusa Predicted Gene

Lj4g3v2789340.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr4

Full length sequence(42341900 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I3STI4_LOTJA 648 95.5 95.8 (tr|I3STI4) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1

TAIR_pep AT2G21960.1 442 76.7 88.3 | Symbols: | unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56180.1); Has 224 Blast hits to 222 proteins in 59 species: Archae - 0; Bacteria - 65; Metazoa - 0; Fungi - 0; Plants - 134; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). | chr2:9354990-9356958 FORWARD LENGTH=332

Medicago Medtr2g066060.1 92.0 32.1 50.0 | plant/F14G9-20 protein | HC | chr2:27680062-27672085 | 20130731

Soybean Glyma08g14970.1 546 84.2 90.4

LJGI gnl|LJGI|TC66375 1974 100.0 100.0 similar to UniRef100_A7PL17 Cluster: Chromosome chr7 scaffold_20, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_20, whole genome shotgun sequence - Vitis vinifera (Grape), partial (90%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj4g3v2789340.1 length: 330 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 82-94

superfamily SSF140990 FtsH 2.4e-10 170-309

Wolf-PSORT

Lj4g3v2789340.1 chlo 6, plas 3, mito 2, E.R. 2

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj4g3v2789340.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I3STI4_LOTJA	648	95.5	95.8	(tr\|I3STI4) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep	AT2G21960.1	442	76.7	88.3	\| Symbols: \| unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56180.1); Has 224 Blast hits to 222 proteins in 59 species: Archae - 0; Bacteria - 65; Metazoa - 0; Fungi - 0; Plants - 134; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). \| chr2:9354990-9356958 FORWARD LENGTH=332
Medicago	Medtr2g066060.1	92.0	32.1	50.0	\| plant/F14G9-20 protein \| HC \| chr2:27680062-27672085 \| 20130731
Soybean	Glyma08g14970.1	546	84.2	90.4
LJGI	gnl\|LJGI\|TC66375	1974	100.0	100.0	similar to UniRef100_A7PL17 Cluster: Chromosome chr7 scaffold_20, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr7 scaffold_20, whole genome shotgun sequence - Vitis vinifera (Grape), partial (90%)

no_ID
Lj4g3v2789340.1				length: 330 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	82-94
superfamily	SSF140990	FtsH	2.4e-10	170-309