Miyakogusa Predicted Gene
- Lj4g3v2787010.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
R0HIV3_9BRAS |
110 |
42.5 |
61.2 |
(tr|R0HIV3) Uncharacterized protein (Fragment) OS=Capsella rubella GN=CARUB_v10018444mg PE=4 SV=1 |
| TAIR_pep |
AT3G42170.1 |
86.3 |
33.5 |
49.0 |
| Symbols: | BED zinc finger ;hAT family dimerisation domain | chr3:14321838-14323928 FORWARD LENGTH=696 |
| Medicago |
--No_Hits--
|
|
|
|
|
| Soybean |
Glyma04g13970.1 |
106 |
43.1 |
58.5 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v2787010.1 |
length: 190 aa. |
| IPR012337 |
Ribonuclease H-like domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003676 |
nucleic acid binding |
|
|
| superfamily |
SSF53098 |
Ribonuclease |
1.3e-07 |
109-168 |
| no_ID |
|
| HMMPanther |
PTHR23272 |
BED |
3.7e-12 |
52-175 |
| HMMPanther |
PTHR23272:SF0 |
SUBFAMILY |
3.7e-12 |
52-175 |
- Wolf-PSORT
Lj4g3v2787010.1 nucl 7, cyto 4, chlo 1, mito 1, extr 1, chlo_mito 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v2787010.1 |
|