Miyakogusa Predicted Gene

Lj4g3v2787000.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1K4R4_SOYBN 468 72.4 76.5 (tr|I1K4R4) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G64813.1 390 61.2 67.9 | Symbols: LIP1 | Ras-related small GTP-binding family protein | chr5:25910836-25912625 FORWARD LENGTH=342
Medicago Medtr8g091980.1 466 70.5 74.9 | Ras-related small GTP-binding family protein | HC | chr8:38387080-38381306 | 20130731
Soybean Glyma05g31790.1 468 72.4 76.5  
LJGI gnl|LJGI|TC70912 1285 99.8 99.8 similar to UniRef100_Q9C5J9 Cluster: Uncharacterized GTP-binding protein At5g64813; n=1; Arabidopsis thaliana|Rep: Uncharacterized GTP-binding protein At5g64813 - Arabidopsis thaliana (Mouse-ear cress), partial (44%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2787000.1 length: 339 aa.
IPR001806 Small GTPase superfamily
method AccNumber shortName E-value location
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
FPrintScan PR00449 RASTRNSFRMNG 5.3e-13 23-44
77-99
151-164
HMMPfam PF00071 Ras 1.2e-19 24-176
IPR003579 Small GTPase superfamily, Rab type
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
Biological Process GO:0015031 protein transport    
HMMSmart SM00175 Rab 1.4e-07 23-237
IPR025662 Sigma-54 interaction domain, ATP-binding site 1
PatternScan PS00675 SIGMA54_INTERACT_1 NA 25-38
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 4.1e-26 18-190
no_ID  
Gene3D G3DSA:3.40.50.300 no description 4.8e-28 22-171
HMMPanther PTHR24072 FAMILY 8.3e-41 34-274
HMMPanther PTHR24072:SF68 SUBFAMILY 8.3e-41 34-274
ProfileScan PS51419 RAB 12.595 11-285
Seg seg seg NA 69-80
142-154
190-204
295-306
319-329
Wolf-PSORT
Lj4g3v2787000.1	nucl 10, cyto 1, plas 1, extr 1, golg 1, golg_plas 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2787000.1