Miyakogusa Predicted Gene

Lj4g3v2785730.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr4

Full length sequence(42341900 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1K4T1_SOYBN 174 72.2 77.8 (tr|I1K4T1) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT3G52860.1 113 58.6 73.7 | Symbols: | unknown protein; Has 86 Blast hits to 86 proteins in 36 species: Archae - 0; Bacteria - 2; Metazoa - 41; Fungi - 13; Plants - 26; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). | chr3:19591998-19592741 REVERSE LENGTH=156

Medicago Medtr8g092180.1 170 69.5 75.8 | mediator of RNA polymerase II transcription subunit 28 | HC | chr8:38521583-38517038 | 20130731

Soybean Glyma05g31930.1 174 72.2 77.8

LJGI gnl|LJGI|TC78988 571 100.0 100.0 similar to UniRef100_A7Q0E9 Cluster: Chromosome chr7 scaffold_42, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_42, whole genome shotgun sequence - Vitis vinifera (Grape), partial (54%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj4g3v2785730.1 length: 126 aa.

no_ID

method AccNumber shortName E-value location

Coil coil coiled-coil NA 94-125

Seg seg seg NA 18-25
35-49

Wolf-PSORT

Lj4g3v2785730.1 nucl 7, nucl_plas 5, cyto 3, mito 2

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj4g3v2785730.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1K4T1_SOYBN	174	72.2	77.8	(tr\|I1K4T1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT3G52860.1	113	58.6	73.7	\| Symbols: \| unknown protein; Has 86 Blast hits to 86 proteins in 36 species: Archae - 0; Bacteria - 2; Metazoa - 41; Fungi - 13; Plants - 26; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). \| chr3:19591998-19592741 REVERSE LENGTH=156
Medicago	Medtr8g092180.1	170	69.5	75.8	\| mediator of RNA polymerase II transcription subunit 28 \| HC \| chr8:38521583-38517038 \| 20130731
Soybean	Glyma05g31930.1	174	72.2	77.8
LJGI	gnl\|LJGI\|TC78988	571	100.0	100.0	similar to UniRef100_A7Q0E9 Cluster: Chromosome chr7 scaffold_42, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr7 scaffold_42, whole genome shotgun sequence - Vitis vinifera (Grape), partial (54%)

no_ID
Lj4g3v2785730.1				length: 126 aa.
method	AccNumber	shortName	E-value	location
Coil	coil	coiled-coil	NA	94-125
Seg	seg	seg	NA	18-25 35-49