Miyakogusa Predicted Gene

Lj4g3v2754280.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7K149_SOYBN 919 72.3 81.9 (tr|K7K149) Cytosine-specific methyltransferase OS=Glycine max PE=3 SV=1
TAIR_pep AT1G69770.1 649 54.3 68.4 | Symbols: CMT3 | chromomethylase 3 | chr1:26248496-26253519 REVERSE LENGTH=839
Medicago Medtr6g088715.1 815 64.9 76.0 | DNA (cytosine-5)-methyltransferase CMT3-like protein | HC | chr6:33856882-33847397 | 20130731
Soybean Glyma01g01120.1 915 72.3 81.9  
LJGI gnl|LJGI|TC65123 1435 99.1 99.1 similar to UniRef100_A7P020 Cluster: Cytosine-specific methyltransferase; n=1; Vitis vinifera|Rep: Cytosine-specific methyltransferase - Vitis vinifera (Grape), partial (34%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2754280.1 length: 610 aa.
IPR000953 Chromo domain/shadow
method AccNumber shortName E-value location
HMMSmart SM00298 Chromatin 3.8e-06 250-306
ProfileScan PS50013 CHROMO_2 11.073 251-301
IPR001025 Bromo adjacent homology (BAH) domain
Molecular Function GO:0003677 DNA binding    
ProfileScan PS51038 BAH 13.680 1-95
IPR001525 C-5 cytosine methyltransferase
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006306 DNA methylation    
Molecular Function GO:0008168 methyltransferase activity    
FPrintScan PR00105 C5METTRFRASE 5e-12 140-156
361-375
407-420
HMMPanther PTHR10629 CYTOSINE-SPECIFIC 1.2e-144 1-610
HMMPfam PF00145 DNA_methylase 1.1e-20 312-494
IPR016197 Chromo domain-like
superfamily SSF54160 Chromo 9.8e-13 245-312
IPR018117 DNA methylase, C-5 cytosine-specific, active site
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006306 DNA methylation    
PatternScan PS00094 C5_MTASE_1 NA 318-330
IPR023779 Chromo domain, conserved site
PatternScan PS00598 CHROMO_1 NA 271-291
IPR023780 Chromo domain
HMMPfam PF00385 Chromo 1.8e-09 251-301
no_ID  
Gene3D G3DSA:2.40.50.40 no description 4e-13 245-300
Gene3D G3DSA:3.40.50.150 no description 3.1e-56 301-498
HMMPanther PTHR10629:SF10 DNA 1.2e-144 1-610
Seg seg seg NA 100-114
232-255
superfamily SSF53335 S-adenosyl-L-methionine-dependent 1.5e-49 137-610
Wolf-PSORT
Lj4g3v2754280.1	nucl 9, cysk 2, cyto 1, E.R. 1, pero 1, cyto_pero 1, cysk_plas 1, cyto_E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2754280.1