Miyakogusa Predicted Gene

Lj4g3v2754240.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KTF7_SOYBN 706 66.7 74.7 (tr|I1KTF7) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT3G18730.1 365 41.3 54.8 | Symbols: TSK, MGO3, BRU1 | tetratricopeptide repeat (TPR)-containing protein | chr3:6446062-6453045 REVERSE LENGTH=1311
Medicago Medtr8g093100.1 669 63.8 70.9 | tonsoku-like protein | HC | chr8:38910873-38923906 | 20130731
Soybean Glyma08g15560.1 705 66.7 74.7  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2754240.1 length: 959 aa.
IPR003590 Leucine-rich repeat, ribonuclease inhibitor subtype
method AccNumber shortName E-value location
HMMSmart SM00368 Leucine 2.2e+02 599-626
676-703
731-758
760-787
788-814
898-925
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 7.7e-22 216-252
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 12.461 22-138
IPR019734 Tetratricopeptide repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00028 Tetratricopeptide 52 22-55
65-98
105-138
217-250
ProfileScan PS50005 TPR 5.310 22-55
65-98
105-138
217-250
IPR024813 TONSOKU
Biological Process GO:0000086 G2/M transition of mitotic cell cycle    
Biological Process GO:0009934 regulation of meristem structural organization    
HMMPanther PTHR10098:SF8 GB 4.1e-131 1-799
no_ID  
Coil coil coiled-coil NA 138-186
Gene3D G3DSA:3.80.10.10 no description 4e-38 885-927
HMMPanther PTHR10098 RAPSYN-RELATED 4.1e-131 1-799
HMMPfam PF13424 TPR_12 7.4e-12 66-136
HMMPfam PF13516 LRR_6 1.4 761-781
Seg seg seg NA 280-295
631-647
673-697
superfamily SSF48452 TPR-like 1.6e-21 16-282
superfamily SSF52047 RNI-like 6e-33 487-931
Wolf-PSORT
Lj4g3v2754240.1	cyto 7, nucl 4, cyto_plas 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2754240.1