Miyakogusa Predicted Gene
- Lj4g3v2731600.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1K4G0_SOYBN |
775 |
93.4 |
96.4 |
(tr|I1K4G0) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G67880.1 |
677 |
78.8 |
91.6 |
| Symbols: | beta-1,4-N-acetylglucosaminyltransferase family protein | chr1:25454081-25455453 REVERSE LENGTH=390 |
| Medicago |
Medtr8g089840.1 |
778 |
93.6 |
97.2 |
| beta-1,4-N-acetylglucosaminyltransferase-like protein | HC | chr8:37478408-37475567 | 20130731 |
| Soybean |
Glyma05g30870.1 |
775 |
93.4 |
96.4 |
|
| LJGI |
gnl|LJGI|TC67358 |
1300 |
99.8 |
99.8 |
similar to UniRef100_A7P4B1 Cluster: Chromosome chr1 scaffold_5, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_5, whole genome shotgun sequence - Vitis vinifera (Grape), partial (56%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v2731600.1 |
length: 391 aa. |
| IPR006813 |
Glycosyl transferase, family 17 |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003830 |
beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity |
|
|
| Biological Process |
GO:0006487 |
protein N-linked glycosylation |
|
|
| Cellular Component |
GO:0016020 |
membrane |
|
|
| HMMPanther |
PTHR12224 |
BETA-1,4-MANNOSYL-GLYCOPROTEIN |
1.2e-193 |
1-391 |
| HMMPfam |
PF04724 |
Glyco_transf_17 |
3.6e-181 |
33-390 |
| no_ID |
|
| HMMPanther |
PTHR12224:SF0 |
SUBFAMILY |
1.2e-193 |
1-391 |
- Wolf-PSORT
Lj4g3v2731600.1 cyto 10, E.R. 2, nucl 1, cysk 1, cysk_nucl 1, E.R._vacu 1, E.R._plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v2731600.1 |
|