Miyakogusa Predicted Gene
- Lj4g3v2717170.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
E2FKH5_SOYBN |
1139 |
76.0 |
85.8 |
(tr|E2FKH5) Sieve element occlusion e OS=Glycine max GN=SEOe PE=2 SV=1 |
| TAIR_pep |
AT3G01680.1 |
543 |
40.3 |
60.7 |
| Symbols: | CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med28 (InterPro:IPR021640); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01670.1); Has 122 Blast hits to 112 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:252033-255246 FORWARD LENGTH=740 |
| Medicago |
Medtr8g089660.1 |
1139 |
76.1 |
86.8 |
| sieve element occlusion protein | HC | chr8:37311495-37308195 | 20130731 |
| Soybean |
Glyma08g13870.1 |
1033 |
68.2 |
78.6 |
|
| LJGI |
gnl|LJGI|TC78158 |
69.9 |
81.1 |
81.1 |
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v2717170.1 |
length: 702 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR13871 |
THIOREDOXIN |
3e-25 |
364-597 |
| HMMPanther |
PTHR13871:SF10 |
SUBFAMILY |
3e-25 |
364-597 |
| Seg |
seg |
seg |
NA |
468-479 |
- Wolf-PSORT
Lj4g3v2717170.1 nucl 5, mito 4.5, chlo 3, cyto_nucl 3, cyto_mito 3
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v2717170.1 |
|