Miyakogusa Predicted Gene

Lj4g3v2717140.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SUH6_LOTJA 292 100.0 100.0 (tr|I3SUH6) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G54580.1 167 62.6 75.5 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr5:22171332-22172656 FORWARD LENGTH=156
Medicago Medtr4g081520.1 174 71.8 81.7 | RNA-binding (RRM/RBD/RNP motif) family protein | HC | chr4:31628430-31625444 | 20130731
Soybean Glyma06g41210.1 211 74.0 81.5  
LJGI gnl|LJGI|TC60956 842 99.8 99.8 similar to UniRef100_A7PNK3 Cluster: Chromosome chr8 scaffold_23, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_23, whole genome shotgun sequence - Vitis vinifera (Grape), partial (65%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2717140.1 length: 141 aa.
IPR000504 RNA recognition motif domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF00076 RRM_1 2.7e-19 46-112
HMMSmart SM00360 RNA 5.8e-23 45-118
ProfileScan PS50102 RRM 18.410 44-122
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 3.5e-25 32-127
no_ID  
HMMPanther PTHR24012 FAMILY 2.7e-54 33-140
HMMPanther PTHR24012:SF62 SUBFAMILY 2.7e-54 33-140
superfamily SSF54928 RNA-binding 8.1e-27 32-141
Wolf-PSORT
Lj4g3v2717140.1	chlo 7, mito 5, nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2717140.1