Miyakogusa Predicted Gene
- Lj4g3v2704750.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1LLK2_SOYBN |
571 |
81.9 |
91.6 |
(tr|I1LLK2) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT1G07220.1 |
482 |
71.4 |
84.9 |
| Symbols: | Arabidopsis thaliana protein of unknown function (DUF821) | chr1:2217073-2219379 REVERSE LENGTH=507 |
| Medicago |
Medtr3g464000.1 |
547 |
80.0 |
87.5 |
| glycosyltransferase family 90 protein | HC | chr3:25695614-25700080 | 20130731 |
| Soybean |
Glyma11g27050.1 |
571 |
81.9 |
91.6 |
|
| LJGI |
gnl|LJGI|TC78779 |
823 |
100.0 |
100.0 |
similar to UniRef100_A7NYF2 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (24%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v2704750.1 |
length: 320 aa. |
| IPR006598 |
Lipopolysaccharide-modifying protein |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF05686 |
Glyco_transf_90 |
2.7e-125 |
2-319 |
| HMMSmart |
SM00672 |
Putative |
1.2e-118 |
31-275 |
| IPR008539 |
Protein of unknown function DUF821, CAP10-like |
| HMMPanther |
PTHR12203:SF11 |
UNCHARACTERIZED |
3.2e-155 |
1-319 |
| no_ID |
|
| HMMPanther |
PTHR12203 |
KDEL |
3.2e-155 |
1-319 |
| Seg |
seg |
seg |
NA |
305-314 |
- Wolf-PSORT
Lj4g3v2704750.1 nucl 3.5, chlo 3, vacu 3, cyto_nucl 3, cyto 1.5, chlo_mito 1.5, E.R._vacu 1.5
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v2704750.1 |
|