Miyakogusa Predicted Gene

Lj4g3v2692430.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KUN5_SOYBN 1150 76.5 82.7 (tr|I1KUN5) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G10930.1 811 68.7 79.6 | Symbols: ATSGS1, RECQ4A, ATRECQ4A | DNA helicase (RECQl4A) | chr1:3648032-3654997 REVERSE LENGTH=1188
Medicago Medtr2g006440.1 1144 74.7 81.8 | ATP-dependent DNA helicase RecQ family protein | HC | chr2:578880-586948 | 20130731
Soybean Glyma08g20070.1 1098 73.9 80.0  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2692430.1 length: 734 aa.
IPR001650 Helicase, C-terminal
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0004386 helicase activity    
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00271 Helicase_C 5.1e-19 643-719
HMMSmart SM00490 helicase 4.7e-28 638-719
ProfileScan PS51194 HELICASE_CTER 19.402 613-734
IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0008026 ATP-dependent helicase activity    
PatternScan PS00690 DEAH_ATP_HELICASE NA 527-536
IPR004589 DNA helicase, ATP-dependent, RecQ type
Biological Process GO:0006310 DNA recombination    
Molecular Function GO:0008026 ATP-dependent helicase activity    
HMMTigr TIGR00614 recQ_fam: 7.5e-147 397-733
IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0008026 ATP-dependent helicase activity    
HMMPfam PF00270 DEAD 1.3e-18 407-575
IPR014001 Helicase, superfamily 1/2, ATP-binding domain
HMMSmart SM00487 DEAD-like 7.9e-33 401-604
ProfileScan PS51192 HELICASE_ATP_BIND_1 22.795 413-588
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.2e-56 443-733
no_ID  
Coil coil coiled-coil NA 263-284
Gene3D G3DSA:3.40.50.300 no description 1.9e-48 384-592
593-732
HMMPanther PTHR13710 DNA 0 8-734
HMMPanther PTHR13710:SF37 PREDICTED: 0 8-734
Seg seg seg NA 162-175
338-348
564-572
Wolf-PSORT
Lj4g3v2692430.1	chlo 8, vacu 3, nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2692430.1