Miyakogusa Predicted Gene

Lj4g3v2678620.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7L8S3_MEDTR 554 93.6 95.4 (tr|G7L8S3) Calpain-like protein OS=Medicago truncatula GN=MTR_8g088520 PE=4 SV=1
TAIR_pep AT1G55350.5 522 87.6 92.9 | Symbols: DEK1 | calpain-type cysteine protease family | chr1:20654463-20664501 REVERSE LENGTH=2179
Medicago Medtr8g088520.1 553 93.6 95.4 | calpain family cysteine protease | HC | chr8:36702342-36724494 | 20130731
Soybean Glyma08g13220.2 550 93.6 94.7  
LJGI gnl|LJGI|BW594717 93.7 100.0 100.0 homologue to UniRef100_Q6SSJ2 Cluster: Phytocalpain; n=1; Nicotiana benthamiana|Rep: Phytocalpain - Nicotiana benthamiana, partial (7%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2678620.1 length: 271 aa.
IPR001300 Peptidase C2, calpain, catalytic domain
method AccNumber shortName E-value location
Molecular Function GO:0004198 calcium-dependent cysteine-type endopeptidase activity    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0006508 proteolysis    
HMMPfam PF00648 Peptidase_C2 7.1e-23 41-122
ProfileScan PS50203 CALPAIN_CAT 24.074 45-128
IPR022682 Peptidase C2, calpain, large subunit, domain III
HMMPfam PF01067 Calpain_III 2.9e-28 124-268
superfamily SSF49758 Calpain 1.6e-29 120-271
IPR022683 Peptidase C2, calpain, domain III
HMMSmart SM00720 no description 5.6e-41 119-269
IPR022684 Peptidase C2, calpain family
Molecular Function GO:0004198 calcium-dependent cysteine-type endopeptidase activity    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0006508 proteolysis    
FPrintScan PR00704 CALPAIN 1.3e-08 104-125
235-263
no_ID  
Gene3D G3DSA:2.60.120.380 no description 1.8e-27 124-263
Gene3D G3DSA:3.90.70.10 no description 1e-24 104-123
HMMPanther PTHR10183 CALPAIN 1.8e-197 1-271
HMMPanther PTHR10183:SF31 CALPAIN-RELATED 1.8e-197 1-271
superfamily SSF54001 Cysteine 1.6e-32 11-126
Wolf-PSORT
Lj4g3v2678620.1	nucl 9.5, cyto_nucl 5.5, chlo 1, mito 1, extr 1, pero 1, chlo_mito 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2678620.1