Miyakogusa Predicted Gene

Lj4g3v2666320.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL B7FKN6_MEDTR 458 83.0 90.9 (tr|B7FKN6) Uncharacterized protein OS=Medicago truncatula GN=MTR_8g088420 PE=1 SV=1
TAIR_pep AT1G55480.1 384 78.4 89.9 | Symbols: ZKT | protein containing PDZ domain, a K-box domain, and a TPR region | chr1:20713822-20715351 FORWARD LENGTH=335
Medicago Medtr8g088420.1 458 83.0 90.9 | tyrosine phosphatase, putative | HC | chr8:36643142-36646685 | 20130731
Soybean Glyma05g30040.1 436 77.4 85.7  
LJGI gnl|LJGI|TC79308 751 99.7 99.7 similar to UniRef100_Q9AT39 Cluster: SHOOT1 protein; n=1; Glycine max|Rep: SHOOT1 protein - Glycine max (Soybean), partial (40%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2666320.1 length: 280 aa.
IPR001478 PDZ domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
ProfileScan PS50106 PDZ 9.149 58-97
superfamily SSF50156 PDZ 1.5e-07 30-95
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 6.1e-09 181-243
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 11.248 178-248
no_ID  
Gene3D G3DSA:2.30.42.10 no description 3.4e-06 30-95
HMMPanther PTHR17130 MITOCHONDRIAL 1.1e-146 43-280
HMMPanther PTHR17130:SF11 BINDING 1.1e-146 43-280
HMMPfam PF13432 TPR_16 4.9e-07 182-242
Seg seg seg NA 40-53
superfamily SSF48452 TPR-like 7.8e-08 185-278
Wolf-PSORT
Lj4g3v2666320.1	chlo 7, cyto 4, mito 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2666320.1