Miyakogusa Predicted Gene

Lj4g3v2665270.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KSN0_SOYBN 1018 84.3 88.9 (tr|I1KSN0) Uncharacterized protein OS=Glycine max PE=3 SV=2
TAIR_pep AT1G30490.1 926 75.7 83.6 | Symbols: PHV, ATHB9 | Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein | chr1:10796328-10800744 REVERSE LENGTH=841
Medicago Medtr2g030130.1 970 80.5 87.0 | class III homeodomain leucine zipper protein | HC | chr2:11288103-11282650 | 20130731
Soybean Glyma08g13110.1 1018 84.3 88.9  
LJGI gnl|LJGI|BP056674 58.0 94.6 94.6 similar to UniRef100_Q5D1M5 Cluster: Class III HD-Zip protein 2; n=1; Populus trichocarpa|Rep: Class III HD-Zip protein 2 - Populus trichocarpa (Western balsam poplar) (Populus balsamiferasubsp. trichocarpa), partial (18%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2665270.1 length: 619 aa.
IPR001356 Homeodomain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMPfam PF00046 Homeobox 2.4e-16 19-77
HMMSmart SM00389 Homeodomain 2.8e-16 16-82
ProfileScan PS50071 HOMEOBOX_2 15.580 14-78
IPR002913 START domain
HMMPfam PF01852 START 3.9e-46 168-375
HMMSmart SM00234 in 5.8e-45 167-377
ProfileScan PS50848 START 24.799 158-358
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 7.9e-18 21-77
superfamily SSF46689 Homeodomain-like 2.2e-16 7-89
IPR023393 START-like domain
Gene3D G3DSA:3.30.530.20 no description 1.8e-18 166-357
no_ID  
Coil coil coiled-coil NA 88-109
HMMPanther PTHR24326 FAMILY 1.8e-87 11-300
HMMPanther PTHR24326:SF63 SUBFAMILY 1.8e-87 11-300
Seg seg seg NA 7-19
163-175
334-345
superfamily SSF55961 Bet 6.5e-34 166-379
Wolf-PSORT
Lj4g3v2665270.1	chlo 6, cyto 4, nucl 3, chlo_mito 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2665270.1