Miyakogusa Predicted Gene

Lj4g3v2644180.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1K467_SOYBN 1057 94.9 98.7 (tr|I1K467) T-complex protein 1 subunit alpha OS=Glycine max PE=3 SV=1
TAIR_pep AT3G20050.1 1004 89.4 96.5 | Symbols: ATTCP-1, TCP-1 | T-complex protein 1 alpha subunit | chr3:6998544-7002266 REVERSE LENGTH=545
Medicago Medtr8g088270.1 1053 94.9 98.9 | TCP-1/cpn60 chaperonin family protein | HC | chr8:36555583-36546870 | 20130731
Soybean Glyma05g29870.1 1057 94.9 98.7  
LJGI gnl|LJGI|TC59086 1427 99.9 99.9 homologue to UniRef100_A5B8L4 Cluster: T-complex protein 1, alpha subunit; n=1; Vitis vinifera|Rep: T-complex protein 1, alpha subunit - Vitis vinifera (Grape), partial (78%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2644180.1 length: 545 aa.
IPR002194 Chaperonin TCP-1, conserved site
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006457 protein folding    
Molecular Function GO:0051082 unfolded protein binding    
PatternScan PS00750 TCP1_1 NA 36-48
PatternScan PS00751 TCP1_2 NA 57-73
PatternScan PS00995 TCP1_3 NA 85-93
IPR002423 Chaperonin Cpn60/TCP-1
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0044267 cellular protein metabolic process    
HMMPanther PTHR11353 CHAPERONIN 0 9-545
HMMPfam PF00118 Cpn60_TCP1 6.5e-145 31-535
superfamily SSF48592 GroEL 3.9e-86 10-538
IPR012715 T-complex protein 1, alpha subunit
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006457 protein folding    
Molecular Function GO:0051082 unfolded protein binding    
HMMPanther PTHR11353:SF20 CHAPERONIN 0 9-545
HMMTigr TIGR02340 chap_CCT_alpha: 3.3e-284 10-541
IPR017998 Chaperone tailless complex polypeptide 1 (TCP-1)
FPrintScan PR00304 TCOMPLEXTCP1 1.3e-29 33-49
55-73
85-104
377-399
411-423
IPR027409 GroEL-like apical domain
Gene3D G3DSA:3.50.7.10 no description 7.9e-44 212-377
superfamily SSF52029 GroEL 7.4e-50 214-371
IPR027410 TCP-1-like chaperonin intermediate domain
Gene3D G3DSA:3.30.260.10 no description 1.7e-29 378-407
IPR027413 GroEL-like equatorial domain
Gene3D G3DSA:1.10.560.10 no description 9.6e-83 408-535
no_ID  
superfamily SSF54849 GroEL-intermediate 3.2e-31 146-410
Wolf-PSORT
Lj4g3v2644180.1	cyto 9, plas 2, chlo 1, nucl 1, pero 1, golg_plas 1, cysk_plas 1, E.R._plas 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2644180.1