Miyakogusa Predicted Gene
- Lj4g3v2628860.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3S4Y9_LOTJA |
287 |
90.0 |
90.0 |
(tr|I3S4Y9) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT5G46530.1 |
210 |
64.9 |
77.3 |
| Symbols: | AWPM-19-like family protein | chr5:18875576-18876779 FORWARD LENGTH=157 |
| Medicago |
Medtr6g068860.1 |
245 |
77.9 |
83.1 |
| ABA induced plasma membrane protein | HC | chr6:24750337-24752005 | 20130731 |
| Soybean |
Glyma08g12830.1 |
279 |
85.0 |
88.8 |
|
| LJGI |
gnl|LJGI|TC62710 |
950 |
99.8 |
99.8 |
similar to UniRef100_A5Y734 Cluster: AWPM19-like protein; n=1; Cucumis melo|Rep: AWPM19-like protein - Cucumis melo (Muskmelon), partial (97%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v2628860.1 |
length: 160 aa. |
| IPR008390 |
AWPM-19-like |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF05512 |
AWPM-19 |
1.6e-66 |
16-155 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
73-86 |
- Wolf-PSORT
Lj4g3v2628860.1 plas 4, vacu 3, golg_plas 3, chlo 2, golg 2, nucl_plas 2, E.R._vacu 2, cysk_plas 2, mito_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v2628860.1 |
|