Miyakogusa Predicted Gene

Lj4g3v2628850.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr4

Full length sequence(42341900 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1KSJ9_SOYBN 294 52.3 64.6 (tr|I1KSJ9) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT1G29530.1 54.7 38.7 62.9 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G34310.3); Has 84 Blast hits to 78 proteins in 24 species: Archae - 2; Bacteria - 4; Metazoa - 9; Fungi - 8; Plants - 55; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). | chr1:10325553-10326651 REVERSE LENGTH=236

Medicago Medtr6g068870.1 178 55.6 66.7 | hypothetical protein | HC | chr6:24756215-24753312 | 20130731

Soybean Glyma08g12820.1 294 52.3 64.6

LJGI gnl|LJGI|TC58328 1170 100.0 100.0 homologue to UniRef100_A5Y733 Cluster: Expressed protein; n=1; Cucumis melo|Rep: Expressed protein - Cucumis melo (Muskmelon), partial (5%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj4g3v2628850.1 length: 341 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 5-15
36-49

Wolf-PSORT

Lj4g3v2628850.1 nucl 13

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj4g3v2628850.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1KSJ9_SOYBN	294	52.3	64.6	(tr\|I1KSJ9) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT1G29530.1	54.7	38.7	62.9	\| Symbols: \| unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G34310.3); Has 84 Blast hits to 78 proteins in 24 species: Archae - 2; Bacteria - 4; Metazoa - 9; Fungi - 8; Plants - 55; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). \| chr1:10325553-10326651 REVERSE LENGTH=236
Medicago	Medtr6g068870.1	178	55.6	66.7	\| hypothetical protein \| HC \| chr6:24756215-24753312 \| 20130731
Soybean	Glyma08g12820.1	294	52.3	64.6
LJGI	gnl\|LJGI\|TC58328	1170	100.0	100.0	homologue to UniRef100_A5Y733 Cluster: Expressed protein; n=1; Cucumis melo\|Rep: Expressed protein - Cucumis melo (Muskmelon), partial (5%)

no_ID
Lj4g3v2628850.1				length: 341 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	5-15 36-49