Miyakogusa Predicted Gene

Lj4g3v2628840.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SJQ0_LOTJA 693 96.3 96.3 (tr|I3SJQ0) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT4G18060.1 515 70.0 82.2 | Symbols: | SH3 domain-containing protein | chr4:10027668-10029662 REVERSE LENGTH=351
Medicago Medtr8g087990.1 594 82.9 88.3 | clathrin-binding protein | HC | chr8:36424228-36418920 | 20130731
Soybean Glyma08g12810.1 618 85.7 91.1  
LJGI gnl|LJGI|TC62334 2072 99.8 99.8 similar to UniRef100_A5Y731 Cluster: Src homology-3 domain protein 3; n=1; Cucumis melo|Rep: Src homology-3 domain protein 3 - Cucumis melo (Muskmelon), partial (97%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2628840.1 length: 350 aa.
IPR001452 Src homology-3 domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00018 SH3_1 4.9e-10 287-331
HMMSmart SM00326 Src 2.8e-15 283-338
ProfileScan PS50002 SH3 12.516 280-339
superfamily SSF50044 SH3-domain 3.6e-17 276-350
IPR027267 Arfaptin homology (AH) domain/BAR domain
Gene3D G3DSA:1.20.1270.60 no description 0.00031 48-264
no_ID  
Coil coil coiled-coil NA 1-22
149-180
185-213
Gene3D G3DSA:2.30.30.40 no description 1e-16 282-344
HMMPanther PTHR22820 SH2 1.5e-57 126-342
HMMPanther PTHR22820:SF9 UNCHARACTERIZED 1.5e-57 126-342
Seg seg seg NA 213-225
superfamily SSF103657 BAR/IMD 8.7e-26 45-257
Wolf-PSORT
Lj4g3v2628840.1	cyto 6, mito 3, cyto_E.R. 3, nucl_plas 2.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2628840.1