Miyakogusa Predicted Gene

Lj4g3v2628810.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1M1L5_SOYBN 454 47.3 60.1 (tr|I1M1L5) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G46550.1 192 36.3 51.7 | Symbols: | DNA-binding bromodomain-containing protein | chr5:18884439-18886503 REVERSE LENGTH=494
Medicago Medtr2g018270.1 400 45.5 56.1 | global transcription factor group protein | HC | chr2:5737871-5742759 | 20130731
Soybean Glyma13g29430.2 454 47.3 60.1  
LJGI gnl|LJGI|TC60631 163 82.4 82.4 similar to UniRef100_A7QV74 Cluster: Chromosome undetermined scaffold_186, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_186, whole genome shotgun sequence - Vitis vinifera (Grape), partial (21%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2628810.1 length: 530 aa.
IPR001487 Bromodomain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
FPrintScan PR00503 BROMODOMAIN 8.5e-20 95-108
111-127
127-145
145-164
Gene3D G3DSA:1.20.920.10 no description 3.3e-38 67-194
HMMPfam PF00439 Bromodomain 5.3e-21 84-168
HMMSmart SM00297 bromo 3.7e-36 73-183
ProfileScan PS50014 BROMODOMAIN_2 19.413 92-164
superfamily SSF47370 Bromodomain 7e-39 47-194
no_ID  
Coil coil coiled-coil NA 438-459
HMMPanther PTHR22880 FALZ-RELATED 2.8e-56 58-184
HMMPanther PTHR22880:SF31 BROMODOMAIN-CONTAINING 2.8e-56 58-184
Seg seg seg NA 444-460
473-490
Wolf-PSORT
Lj4g3v2628810.1	nucl 10, chlo 2, cyto 1, cysk 1, chlo_mito 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2628810.1