Miyakogusa Predicted Gene

Lj4g3v2628690.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL Q533S0_LOTJA 439 94.3 94.8 (tr|Q533S0) MADS box protein AGb (Fragment) OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT4G18960.1 328 64.8 79.4 | Symbols: AG | K-box region and MADS-box transcription factor family protein | chr4:10383917-10388272 FORWARD LENGTH=252
Medicago Medtr8g087860.1 390 78.6 87.9 | MADS-box transcription factor | HC | chr8:36350163-36354700 | 20130731
Soybean Glyma15g09500.1 382 78.5 86.2  
LJGI gnl|LJGI|TC75483 1334 99.3 99.3 UniRef100_Q533S0 Cluster: MADS box protein AGb; n=1; Lotus japonicus|Rep: MADS box protein AGb - Lotus japonicus, complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2628690.1 length: 247 aa.
IPR002100 Transcription factor, MADS-box
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0046983 protein dimerization activity    
FPrintScan PR00404 MADSDOMAIN 6.2e-33 20-40
40-55
55-76
HMMPfam PF00319 SRF-TF 5.8e-29 26-75
HMMSmart SM00432 no description 2.3e-42 18-77
PatternScan PS00350 MADS_BOX_1 NA 20-74
ProfileScan PS50066 MADS_BOX_2 34.076 18-78
superfamily SSF55455 SRF-like 3.5e-31 19-90
IPR002487 Transcription factor, K-box
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF01486 K-box 4.7e-32 96-190
ProfileScan PS51297 K_BOX 14.343 104-194
no_ID  
Coil coil coiled-coil NA 104-132
141-162
HMMPanther PTHR11945 MADS 2.5e-81 6-240
HMMPanther PTHR11945:SF19 MADS 2.5e-81 6-240
Seg seg seg NA 91-101
Wolf-PSORT
Lj4g3v2628690.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2628690.1