Miyakogusa Predicted Gene
- Lj4g3v2604800.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7LJF6_MEDTR |
899 |
92.0 |
96.6 |
(tr|G7LJF6) Nucleobase ascorbate transporter OS=Medicago truncatula GN=MTR_8g086520 PE=4 SV=1 |
| TAIR_pep |
AT2G34190.1 |
828 |
82.7 |
92.8 |
| Symbols: | Xanthine/uracil permease family protein | chr2:14437065-14439407 FORWARD LENGTH=524 |
| Medicago |
Medtr8g086520.1 |
899 |
92.0 |
96.6 |
| nucleobase-ascorbate transporter-like protein | HC | chr8:35894100-35898495 | 20130731 |
| Soybean |
Glyma06g06840.1 |
880 |
90.3 |
94.9 |
|
| LJGI |
gnl|LJGI|TC74262 |
672 |
100.0 |
100.0 |
similar to UniRef100_A7QDI4 Cluster: Chromosome chr10 scaffold_81, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr10 scaffold_81, whole genome shotgun sequence - Vitis vinifera (Grape), partial (21%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v2604800.1 |
length: 475 aa. |
| IPR006043 |
Xanthine/uracil/vitamin C permease |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005215 |
transporter activity |
|
|
| Biological Process |
GO:0006810 |
transport |
|
|
| Cellular Component |
GO:0016020 |
membrane |
|
|
| Biological Process |
GO:0055085 |
transmembrane transport |
|
|
| HMMPanther |
PTHR11119 |
XANTHINE-URACIL |
1.5e-230 |
1-473 |
| HMMPfam |
PF00860 |
Xan_ur_permease |
8.3e-61 |
6-387 |
| no_ID |
|
| HMMPanther |
PTHR11119:SF8 |
SODIUM-DEPENDENT |
1.5e-230 |
1-473 |
- Wolf-PSORT
Lj4g3v2604800.1 vacu 10, plas 2, cyto 1, E.R. 1, nucl_plas 1, golg_plas 1, cysk_plas 1, mito_plas 1, cyto_E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v2604800.1 |
|