Miyakogusa Predicted Gene
- Lj4g3v2604080.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SNP4_LOTJA |
541 |
95.2 |
95.2 |
(tr|I3SNP4) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT4G25650.1 |
392 |
59.4 |
75.0 |
| Symbols: ACD1-LIKE, PTC52, TIC55-IV | ACD1-like | chr4:13081021-13083153 REVERSE LENGTH=536 |
| Medicago |
Medtr8g085840.1 |
531 |
83.9 |
89.5 |
| chlorophyllide A oxygenase | HC | chr8:35594442-35589475 | 20130731 |
| Soybean |
Glyma05g28900.1 |
516 |
80.2 |
85.8 |
|
| LJGI |
gnl|LJGI|TC65104 |
1641 |
100.0 |
100.0 |
similar to UniRef100_A7P068 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (39%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v2604080.1 |
length: 303 aa. |
| IPR013626 |
Pheophorbide a oxygenase |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0010277 |
chlorophyllide a oxygenase [overall] activity |
|
|
| Biological Process |
GO:0055114 |
oxidation-reduction process |
|
|
| HMMPfam |
PF08417 |
PaO |
4.1e-27 |
71-169 |
| no_ID |
|
| HMMPanther |
PTHR21266 |
IRON-SULFUR |
7.3e-77 |
1-238 |
| HMMPanther |
PTHR21266:SF3 |
PHEOPHORBIDE |
7.3e-77 |
1-238 |
| Seg |
seg |
seg |
NA |
143-154 |
| superfamily |
SSF55961 |
Bet |
7.8e-21 |
4-197 |
- Wolf-PSORT
Lj4g3v2604080.1 cyto 9, E.R. 2, nucl 1, vacu 1, cysk 1, cysk_nucl 1, E.R._plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v2604080.1 |
|