Miyakogusa Predicted Gene
- Lj4g3v2603880.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1KSA4_SOYBN |
192 |
66.9 |
82.8 |
(tr|I1KSA4) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G55265.1 |
134 |
56.3 |
67.2 |
| Symbols: | Protein of unknown function, DUF538 | chr1:20617326-20617853 FORWARD LENGTH=175 |
| Medicago |
Medtr8g085590.1 |
173 |
60.3 |
79.4 |
| DUF538 family protein | HC | chr8:35457713-35458482 | 20130731 |
| Soybean |
Glyma08g11870.1 |
192 |
66.9 |
82.8 |
|
| LJGI |
gnl|LJGI|TC82731 |
948 |
100.0 |
100.0 |
similar to UniRef100_A7P043 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (28%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v2603880.1 |
length: 158 aa. |
| IPR007493 |
Protein of unknown function DUF538 |
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:2.30.240.10 |
no description |
1e-33 |
17-143 |
| HMMPfam |
PF04398 |
DUF538 |
1.3e-27 |
27-136 |
| superfamily |
SSF141562 |
At5g01610-like |
7.6e-35 |
4-146 |
- Wolf-PSORT
Lj4g3v2603880.1 extr 5, vacu 5, E.R. 2, mito 1, plas 1, mito_plas 1, cyto_E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v2603880.1 |
|