Miyakogusa Predicted Gene
- Lj4g3v2603840.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
C6SVG8_SOYBN |
249 |
61.9 |
77.3 |
(tr|C6SVG8) Uncharacterized protein OS=Glycine max PE=2 SV=1 |
| TAIR_pep |
AT1G55260.2 |
140 |
46.1 |
59.4 |
| Symbols: | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr1:20614663-20616158 FORWARD LENGTH=224 |
| Medicago |
Medtr8g085560.1 |
247 |
62.1 |
73.2 |
| protease inhibitor/seed storage/LTP family protein | HC | chr8:35432972-35436227 | 20130731 |
| Soybean |
Glyma08g11840.1 |
249 |
61.9 |
77.3 |
|
| LJGI |
gnl|LJGI|TC62908 |
1172 |
100.0 |
100.0 |
weakly similar to UniRef100_A7QR85 Cluster: Non-specific lipid-transfer protein; n=1; Vitis vinifera|Rep: Non-specific lipid-transfer protein - Vitis vinifera (Grape), partial (65%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v2603840.1 |
length: 195 aa. |
| IPR016140 |
Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF14368 |
LTP_2 |
1.1e-14 |
18-112 |
| HMMSmart |
SM00499 |
Plant |
2.9e-05 |
35-112 |
| superfamily |
SSF47699 |
Bifunctional |
1.1e-16 |
33-115 |
| no_ID |
|
| Gene3D |
G3DSA:1.10.110.10 |
no description |
1.5e-15 |
33-113 |
| Seg |
seg |
seg |
NA |
9-21 |
- Wolf-PSORT
Lj4g3v2603840.1 extr 8, cyto 2, vacu 2, chlo 1, mito 1, cyto_nucl 1, chlo_mito 1, E.R._vacu 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v2603840.1 |
|