Miyakogusa Predicted Gene

Lj4g3v2603750.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1K3U4_SOYBN 680 85.1 92.3 (tr|I1K3U4) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G13730.1 593 74.9 87.3 | Symbols: | Ypt/Rab-GAP domain of gyp1p superfamily protein | chr4:7970299-7974055 FORWARD LENGTH=449
Medicago Medtr8g085300.1 640 84.9 92.8 | RabGAP/TBC domain protein | HC | chr8:35334451-35330009 | 20130731
Soybean Glyma05g28660.1 680 85.1 92.3  
LJGI gnl|LJGI|TC58759 2567 99.9 99.9 similar to UniRef100_A7QHM3 Cluster: Chromosome chr5 scaffold_98, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_98, whole genome shotgun sequence - Vitis vinifera (Grape), partial (81%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2603750.1 length: 432 aa.
IPR000195 Rab-GTPase-TBC domain
method AccNumber shortName E-value location
Molecular Function GO:0005097 Rab GTPase activator activity    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0032313 regulation of Rab GTPase activity    
HMMPfam PF00566 RabGAP-TBC 1.7e-43 204-398
HMMSmart SM00164 Domain 3e-52 103-401
ProfileScan PS50086 TBC_RABGAP 33.183 108-375
superfamily SSF47923 Ypt/Rab-GAP 2.3e-33 81-334
309-430
no_ID  
Gene3D G3DSA:1.10.8.270 no description 1.8e-25 195-295
HMMPanther PTHR22957 TBC1 3.8e-189 6-430
HMMPanther PTHR22957:SF27 TBC1 3.8e-189 6-430
Seg seg seg NA 12-25
32-54
Wolf-PSORT
Lj4g3v2603750.1	chlo 6, nucl 2, cyto 2, vacu 2, cyto_nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2603750.1