Miyakogusa Predicted Gene

Lj4g3v2576110.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KS45_SOYBN 1325 77.8 87.2 (tr|I1KS45) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G27270.1 802 52.9 70.3 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:9605650-9609625 FORWARD LENGTH=1038
Medicago Medtr8g080940.2 1286 76.4 85.3 | PPR containing plant-like protein | HC | chr8:34956441-34962226 | 20130731
Soybean Glyma08g11220.1 1325 77.8 87.2  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2576110.2 length: 826 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.00016 16-45
121-149
155-185
195-218
296-322
467-494
535-565
571-597
607-635
HMMPfam PF13041 PPR_2 8.4e-08 50-96
637-685
712-754
HMMTigr TIGR00756 PPR: 0.00094 16-49
50-82
85-118
120-153
467-494
535-565
571-603
607-637
640-674
675-709
712-743
745-772
ProfileScan PS51375 PPR 6.851 13-47
48-82
83-117
118-152
153-187
188-222
292-326
257-291
463-497
429-459
533-567
498-532
568-602
603-637
638-672
673-707
708-742
743-773
777-811
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 9.9e-08 127-318
439-538
570-799
no_ID  
HMMPanther PTHR24015 FAMILY 2.8e-115 13-772
Seg seg seg NA 379-391
superfamily SSF48452 TPR-like 4.8e-08 439-643
120-215
superfamily SSF81901 HCP-like 1.5e-06 571-791
Wolf-PSORT
Lj4g3v2576110.2	chlo 9, nucl 2, E.R. 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2576110.2