Miyakogusa Predicted Gene

Lj4g3v2576100.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1K3Q2_SOYBN 964 84.1 89.7 (tr|I1K3Q2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G48570.1 783 71.9 84.9 | Symbols: ROF2, ATFKBP65, FKBP65 | FKBP-type peptidyl-prolyl cis-trans isomerase family protein | chr5:19690746-19693656 REVERSE LENGTH=578
Medicago Medtr8g080980.1 949 82.3 88.4 | peptidyl-prolyl cis-trans isomerase FKBP62-like protein | HC | chr8:34977709-34974074 | 20130731
Soybean Glyma05g28260.1 964 84.1 89.7  
LJGI gnl|LJGI|BP038125 529 100.0 100.0 similar to UniRef100_A7R4L2 Cluster: Chromosome undetermined scaffold_734, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_734, whole genome shotgun sequence - Vitis vinifera (Grape), partial (14%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2576100.1 length: 571 aa.
IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain
method AccNumber shortName E-value location
Biological Process GO:0006457 protein folding    
HMMPfam PF00254 FKBP_C 1.5e-24 52-142
169-259
284-379
ProfileScan PS50059 FKBP_PPIASE 23.496 57-145
173-262
290-382
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 2.8e-29 404-553
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 14.347 399-432
448-515
IPR013105 Tetratricopeptide TPR2
HMMPfam PF07719 TPR_2 0.02 405-427
IPR019734 Tetratricopeptide repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00028 Tetratricopeptide 5.6e-05 399-432
448-481
482-515
ProfileScan PS50005 TPR 9.617 399-432
448-481
482-515
IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type
HMMPanther PTHR10516 PEPTIDYL-PROLYL 0 1-570
no_ID  
Coil coil coiled-coil NA 515-536
Gene3D G3DSA:3.10.50.40 no description 3.1e-39 28-147
148-261
266-403
HMMPanther PTHR10516:SF66 PEPTIDYL-PROLYL 0 1-570
HMMPfam PF13414 TPR_11 6.7e-11 454-513
Seg seg seg NA 26-48
394-406
superfamily SSF48452 TPR-like 8.9e-30 386-552
superfamily SSF54534 FKBP-like 7.5e-25 15-145
264-403
151-262
Wolf-PSORT
Lj4g3v2576100.1	pero 8, cyto 4, chlo 2, cyto_nucl 2, cyto_E.R. 2, cyto_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2576100.1