Miyakogusa Predicted Gene

Lj4g3v2575040.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KS45_SOYBN 1145 80.1 88.8 (tr|I1KS45) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G27270.1 760 55.9 71.7 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:9605650-9609625 FORWARD LENGTH=1038
Medicago Medtr8g080940.2 1090 77.0 85.4 | PPR containing plant-like protein | HC | chr8:34956441-34962226 | 20130731
Soybean Glyma08g11220.1 1145 80.1 88.8  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2575040.2 length: 684 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.0001 11-41
186-216
226-249
327-353
498-525
HMMPfam PF13041 PPR_2 8.7e-11 45-92
114-160
564-607
637-681
HMMTigr TIGR00756 PPR: 1e-05 11-44
47-80
81-113
116-149
151-184
498-525
566-596
602-634
638-668
ProfileScan PS51375 PPR 5.821 9-43
44-78
79-113
114-148
149-183
184-218
219-253
323-357
288-322
494-528
460-490
564-598
529-563
599-633
634-668
669-684
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1.1e-19 599-663
no_ID  
HMMPanther PTHR24015 FAMILY 2.4e-104 1-684
HMMPanther PTHR24015:SF0 SUBFAMILY 2.4e-104 1-684
Seg seg seg NA 410-422
superfamily SSF48452 TPR-like 4.8e-08 151-246
superfamily SSF81901 HCP-like 1.8e-11 439-676
Wolf-PSORT
Lj4g3v2575040.2	chlo 8, cyto 4, chlo_mito 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2575040.2