Miyakogusa Predicted Gene

Lj4g3v2575040.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KS45_SOYBN 1446 76.6 85.0 (tr|I1KS45) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G27270.1 1027 59.0 73.4 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:9605650-9609625 FORWARD LENGTH=1038
Medicago Medtr8g080940.1 1385 74.8 82.2 | PPR containing plant-like protein | HC | chr8:34956434-34962226 | 20130731
Soybean Glyma08g11220.1 1446 76.6 85.0  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2575040.1 length: 903 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.00014 405-435
445-468
546-572
717-744
HMMPfam PF13041 PPR_2 1.2e-10 192-239
264-311
333-379
783-827
856-900
HMMTigr TIGR00756 PPR: 1.4e-05 195-229
230-263
266-299
300-332
335-368
370-403
717-744
785-815
821-853
857-887
ProfileScan PS51375 PPR 5.821 193-227
228-262
263-297
298-332
333-367
368-402
403-437
438-472
542-576
507-541
713-747
679-709
783-817
748-782
818-852
853-887
888-903
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1e-06 377-568
690-810
818-880
no_ID  
HMMPanther PTHR24015 FAMILY 1.3e-115 58-903
HMMPanther PTHR24015:SF0 SUBFAMILY 1.3e-115 58-903
Seg seg seg NA 13-37
57-72
629-641
superfamily SSF48452 TPR-like 0.002 370-465
443-568
superfamily SSF81901 HCP-like 1.8e-11 658-895
Wolf-PSORT
Lj4g3v2575040.1	chlo 12, plas 1, E.R. 1, E.R._plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2575040.1