Miyakogusa Predicted Gene
- Lj4g3v2563540.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1LN68_SOYBN |
701 |
74.6 |
81.8 |
(tr|I1LN68) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G27340.1 |
577 |
59.8 |
73.6 |
| Symbols: | Galactose oxidase/kelch repeat superfamily protein | chr1:9495741-9497857 FORWARD LENGTH=467 |
| Medicago |
Medtr3g085160.1 |
675 |
75.7 |
83.4 |
| F-box only-like protein | HC | chr3:38481986-38477479 | 20130731 |
| Soybean |
Glyma11g36960.1 |
701 |
74.6 |
81.8 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v2563540.1 |
length: 453 aa. |
| IPR001810 |
F-box domain, cyclin-like |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| HMMPfam |
PF00646 |
F-box |
1.8e-06 |
108-145 |
| HMMSmart |
SM00256 |
A |
1.9e-05 |
111-151 |
| ProfileScan |
PS50181 |
FBOX |
9.233 |
105-150 |
| superfamily |
SSF81383 |
F-box |
8.7e-12 |
98-196 |
| IPR011043 |
Galactose oxidase/kelch, beta-propeller |
| superfamily |
SSF50965 |
Galactose |
1.2e-17 |
147-442 |
| IPR015916 |
Galactose oxidase, beta-propeller |
| Gene3D |
G3DSA:2.130.10.80 |
no description |
2.1e-12 |
141-428 |
| no_ID |
|
| Gene3D |
G3DSA:1.20.1280.50 |
no description |
5.8e-07 |
103-140 |
| HMMPanther |
PTHR22844 |
F-BOX |
1e-11 |
112-229 |
| HMMPanther |
PTHR22844:SF87 |
SUBFAMILY |
1e-11 |
112-229 |
| Seg |
seg |
seg |
NA |
82-98 |
- Wolf-PSORT
Lj4g3v2563540.1 nucl 6, cyto 4, E.R. 2, cyto_pero 2, cyto_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v2563540.1 |
|