Miyakogusa Predicted Gene
- Lj4g3v2551470.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7MP83_SOYBN |
448 |
74.8 |
83.9 |
(tr|K7MP83) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G67330.1 |
327 |
58.5 |
69.4 |
| Symbols: | Protein of unknown function (DUF579) | chr1:25214118-25214993 FORWARD LENGTH=291 |
| Medicago |
Medtr3g085270.1 |
438 |
75.5 |
82.1 |
| polysaccharide biosynthesis protein | HC | chr3:38532337-38533773 | 20130731 |
| Soybean |
Glyma18g00940.1 |
446 |
74.8 |
83.9 |
|
| LJGI |
gnl|LJGI|TC72979 |
1013 |
100.0 |
100.0 |
similar to UniRef100_A7P9V1 Cluster: Chromosome chr14 scaffold_9, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_9, whole genome shotgun sequence - Vitis vinifera (Grape), partial (37%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v2551470.1 |
length: 277 aa. |
| IPR006514 |
Xylan biosynthesis protein IRX15/IRX15L |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMTigr |
TIGR01627 |
A_thal_3515: |
9.7e-67 |
66-277 |
| IPR021148 |
Putative polysaccharide biosynthesis protein |
| HMMPfam |
PF04669 |
Polysacc_synt_4 |
1.9e-60 |
84-262 |
| no_ID |
|
| HMMPanther |
PTHR31444 |
FAMILY |
2.2e-49 |
60-262 |
| HMMPanther |
PTHR31444:SF0 |
SUBFAMILY |
2.2e-49 |
60-262 |
- Wolf-PSORT
Lj4g3v2551470.1 extr 6, chlo 2, vacu 2, nucl 1, mito 1, plas 1, E.R. 1, nucl_plas 1, E.R._plas 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v2551470.1 |
|