Miyakogusa Predicted Gene

Lj4g3v2539410.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MPC3_SOYBN 1178 84.3 91.9 (tr|I1MPC3) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT3G49142.1 929 66.9 80.3 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:18215788-18217848 REVERSE LENGTH=686
Medicago Medtr8g063290.1 1157 82.5 90.7 | pentatricopeptide (PPR) repeat protein | HC | chr8:26513420-26510735 | 20130731
Soybean Glyma16g28950.1 1097 86.3 93.4  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2539410.1 length: 671 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.13 170-196
339-364
442-463
509-534
HMMPfam PF13041 PPR_2 2e-08 95-142
196-239
265-310
365-412
HMMTigr TIGR00756 PPR: 0.0015 98-130
170-198
198-232
266-300
339-366
368-400
440-463
ProfileScan PS51375 PPR 7.465 95-129
64-94
196-230
165-195
130-164
264-298
299-333
365-399
334-364
400-430
436-466
502-536
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 8.2e-07 495-522
no_ID  
HMMPanther PTHR24015 FAMILY 0 38-671
HMMPanther PTHR24015:SF88 UNKNOWN 0 38-671
HMMPfam PF14432 DYW_deaminase 1.1e-19 547-661
Wolf-PSORT
Lj4g3v2539410.1	chlo 8, mito 3.5, cyto_mito 2.5, nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2539410.1