Miyakogusa Predicted Gene

Lj4g3v2513900.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7L5V1_SOYBN 968 78.7 85.6 (tr|K7L5V1) Signal recognition particle subunit SRP72 OS=Glycine max PE=3 SV=1
TAIR_pep AT1G67680.1 726 57.8 73.4 | Symbols: | SRP72 RNA-binding domain | chr1:25365962-25368464 REVERSE LENGTH=664
Medicago Medtr8g079990.1 971 75.9 84.5 | signal recognition particle 72 kDa protein | HC | chr8:34337609-34341941 | 20130731
Soybean Glyma05g27690.1 955 77.4 84.4  
LJGI gnl|LJGI|TC61163 1485 99.9 99.9 similar to UniRef100_A7QBT9 Cluster: Chromosome chr1 scaffold_75, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_75, whole genome shotgun sequence - Vitis vinifera (Grape), partial (35%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2513900.1 length: 662 aa.
IPR011990 Tetratricopeptide-like helical
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 2.4e-08 84-244
315-483
IPR013699 Signal recognition particle, SRP72 subunit, RNA-binding
Biological Process GO:0006614 SRP-dependent cotranslational protein targeting to membrane    
Molecular Function GO:0008312 7S RNA binding    
Cellular Component GO:0048500 signal recognition particle    
HMMPfam PF08492 SRP72 1.3e-16 551-597
IPR026270 Signal recognition particle, SRP72 subunit
Biological Process GO:0006614 SRP-dependent cotranslational protein targeting to membrane    
HMMPanther PTHR14094 SIGNAL 1.5e-263 2-662
no_ID  
HMMPanther PTHR14094:SF9 SIGNAL 1.5e-263 2-662
HMMPfam PF12895 Apc3 1.2e-06 35-138
Seg seg seg NA 2-17
385-404
553-583
651-661
superfamily SSF48452 TPR-like 6.2e-07 15-208
20-482
Wolf-PSORT
Lj4g3v2513900.1	nucl 6, nucl_plas 4.5, cyto 4, chlo 2, cyto_pero 2, cyto_E.R. 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2513900.1