Miyakogusa Predicted Gene

Lj4g3v2401060.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr4

Full length sequence(42341900 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I3S0F0_LOTJA 292 89.5 90.1 (tr|I3S0F0) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1

TAIR_pep AT1G31940.1 62.8 42.6 77.8 | Symbols: | unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35585.1); Has 67 Blast hits to 67 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:11470293-11471154 REVERSE LENGTH=158

Medicago Medtr5g027940.1 67.0 40.2 65.9 | hypothetical protein | HC | chr5:11666453-11669433 | 20130731

Soybean Glyma05g26810.1 204 66.9 75.3

LJGI gnl|LJGI|TC59119 975 100.0 100.0 similar to UniRef100_A7P411 Cluster: Chromosome chr1 scaffold_5, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_5, whole genome shotgun sequence - Vitis vinifera (Grape), partial (8%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj4g3v2401060.1 length: 162 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 129-144

Wolf-PSORT

Lj4g3v2401060.1 nucl 7, cyto 2, plas 2, cyto_plas 2

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj4g3v2401060.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I3S0F0_LOTJA	292	89.5	90.1	(tr\|I3S0F0) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep	AT1G31940.1	62.8	42.6	77.8	\| Symbols: \| unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35585.1); Has 67 Blast hits to 67 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). \| chr1:11470293-11471154 REVERSE LENGTH=158
Medicago	Medtr5g027940.1	67.0	40.2	65.9	\| hypothetical protein \| HC \| chr5:11666453-11669433 \| 20130731
Soybean	Glyma05g26810.1	204	66.9	75.3
LJGI	gnl\|LJGI\|TC59119	975	100.0	100.0	similar to UniRef100_A7P411 Cluster: Chromosome chr1 scaffold_5, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr1 scaffold_5, whole genome shotgun sequence - Vitis vinifera (Grape), partial (8%)

no_ID
Lj4g3v2401060.1				length: 162 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	129-144