Miyakogusa Predicted Gene

Lj4g3v2401010.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SCM2_LOTJA 674 79.3 79.3 (tr|I3SCM2) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G68130.1 329 86.7 95.2 | Symbols: AtIDD14, IDD14 | indeterminate(ID)-domain 14 | chr1:25532484-25534317 FORWARD LENGTH=419
Medicago Medtr8g017210.1 231 63.7 81.5 | C2H2-like zinc finger protein, putative | HC | chr8:5790010-5786899 | 20130731
Soybean Glyma08g09760.1 490 59.9 64.9  
LJGI gnl|LJGI|TC60011 2510 100.0 100.0 similar to UniRef100_A7PHC7 Cluster: Chromosome chr17 scaffold_16, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_16, whole genome shotgun sequence - Vitis vinifera (Grape), partial (64%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2401010.1 length: 421 aa.
IPR007087 Zinc finger, C2H2
method AccNumber shortName E-value location
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF00096 zf-C2H2 0.0015 60-82
PatternScan PS00028 ZINC_FINGER_C2H2_1 NA 62-82
ProfileScan PS50157 ZINC_FINGER_C2H2_2 10.970 60-82
IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain
Molecular Function GO:0003676 nucleic acid binding    
Gene3D G3DSA:3.30.160.60 no description 0.00014 59-82
IPR015880 Zinc finger, C2H2-like
HMMSmart SM00355 zinc 52 60-82
102-132
138-165
no_ID  
Coil coil coiled-coil NA 319-375
HMMPanther PTHR10593 SERINE/THREONINE-PROTEIN 4.8e-76 31-182
HMMPanther PTHR10593:SF17 SUBFAMILY 4.8e-76 31-182
Seg seg seg NA 6-19
200-213
221-237
288-298
315-344
superfamily SSF57667 C2H2 9.6e-05 133-176
59-84
Wolf-PSORT
Lj4g3v2401010.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2401010.1