Miyakogusa Predicted Gene
- Lj4g3v2379450.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SPM1_LOTJA |
699 |
96.3 |
96.3 |
(tr|I3SPM1) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT3G23580.1 |
533 |
72.4 |
81.8 |
| Symbols: RNR2, RNR2A | ribonucleotide reductase 2A | chr3:8460261-8462574 FORWARD LENGTH=341 |
| Medicago |
Medtr4g117370.1 |
603 |
83.2 |
88.3 |
| ribonucleoside-diphosphate reductase small chain | HC | chr4:48682564-48678758 | 20130731 |
| Soybean |
Glyma07g38570.1 |
608 |
84.0 |
89.2 |
|
| LJGI |
gnl|LJGI|TC69190 |
2010 |
98.6 |
98.6 |
homologue to UniRef100_Q9XE60 Cluster: Ribonucleotide reductase small subunit; n=1; Glycine max|Rep: Ribonucleotide reductase small subunit - Glycine max (Soybean), partial (98%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v2379450.1 |
length: 351 aa. |
| IPR000358 |
Ribonucleotide reductase small subunit |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0009186 |
deoxyribonucleoside diphosphate metabolic process |
|
|
| Biological Process |
GO:0055114 |
oxidation-reduction process |
|
|
| HMMPanther |
PTHR23409 |
RIBONUCLEOSIDE-DIPHOSPHATE |
9.9e-231 |
12-351 |
| HMMPfam |
PF00268 |
Ribonuc_red_sm |
1.1e-113 |
30-309 |
| PatternScan |
PS00368 |
RIBORED_SMALL |
NA |
127-143 |
| IPR009078 |
Ferritin-like superfamily |
| Molecular Function |
GO:0016491 |
oxidoreductase activity |
|
|
| Molecular Function |
GO:0046914 |
transition metal ion binding |
|
|
| Biological Process |
GO:0055114 |
oxidation-reduction process |
|
|
| superfamily |
SSF47240 |
Ferritin-like |
8.3e-125 |
7-329 |
| IPR012348 |
Ribonucleotide reductase-related |
| Molecular Function |
GO:0016491 |
oxidoreductase activity |
|
|
| Biological Process |
GO:0055114 |
oxidation-reduction process |
|
|
| Gene3D |
G3DSA:1.10.620.20 |
no description |
1.7e-121 |
17-308 |
| no_ID |
|
| HMMPanther |
PTHR23409:SF6 |
SUBFAMILY |
9.9e-231 |
12-351 |
| Seg |
seg |
seg |
NA |
191-202 |
- Wolf-PSORT
Lj4g3v2379450.1 E.R. 4, cyto 2, plas 2, cyto_plas 2, nucl 1.5, cysk_nucl 1.5, mito_plas 1.5
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v2379450.1 |
|