Miyakogusa Predicted Gene

Lj4g3v2375020.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr4

Full length sequence(42341900 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL G7JHX1_MEDTR 493 72.7 80.2 (tr|G7JHX1) Putative uncharacterized protein OS=Medicago truncatula GN=MTR_4g118510 PE=4 SV=1

TAIR_pep AT4G15545.1 355 57.7 70.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:8875932-8877567 FORWARD LENGTH=337

Medicago Medtr4g118510.1 493 72.7 80.2 | hypothetical protein | HC | chr4:49084996-49088873 | 20130731

Soybean Glyma17g02420.1 478 70.7 78.7

LJGI gnl|LJGI|TC67909 2022 100.0 100.0 similar to UniRef100_A7NWB5 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape), partial (85%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj4g3v2375020.1 length: 339 aa.

no_ID

method AccNumber shortName E-value location

Coil coil coiled-coil NA 50-113

HMMPanther PTHR31218 FAMILY 7.2e-22 268-337

Seg seg seg NA 145-155
162-175
252-269

Wolf-PSORT

Lj4g3v2375020.1 nucl 8, cyto 6

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj4g3v2375020.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	G7JHX1_MEDTR	493	72.7	80.2	(tr\|G7JHX1) Putative uncharacterized protein OS=Medicago truncatula GN=MTR_4g118510 PE=4 SV=1
TAIR_pep	AT4G15545.1	355	57.7	70.1	\| Symbols: \| unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). \| chr4:8875932-8877567 FORWARD LENGTH=337
Medicago	Medtr4g118510.1	493	72.7	80.2	\| hypothetical protein \| HC \| chr4:49084996-49088873 \| 20130731
Soybean	Glyma17g02420.1	478	70.7	78.7
LJGI	gnl\|LJGI\|TC67909	2022	100.0	100.0	similar to UniRef100_A7NWB5 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape), partial (85%)

no_ID
Lj4g3v2375020.1				length: 339 aa.
method	AccNumber	shortName	E-value	location
Coil	coil	coiled-coil	NA	50-113
HMMPanther	PTHR31218	FAMILY	7.2e-22	268-337
Seg	seg	seg	NA	145-155 162-175 252-269