Miyakogusa Predicted Gene
- Lj4g3v2374990.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
B9RSW6_RICCO |
132 |
75.0 |
86.2 |
(tr|B9RSW6) Inosine-uridine preferring nucleoside hydrolase, putative OS=Ricinus communis GN=RCOM_0679090 PE=4 SV=1 |
| TAIR_pep |
AT5G18870.1 |
90.1 |
77.3 |
87.9 |
| Symbols: | Inosine-uridine preferring nucleoside hydrolase family protein | chr5:6298386-6300289 FORWARD LENGTH=258 |
| Medicago |
Medtr4g118570.1 |
89.0 |
79.0 |
88.7 |
| inosine-uridine preferring nucleoside hydrolase | HC | chr4:49105607-49099970 | 20130731 |
| Soybean |
Glyma13g28400.2 |
107 |
79.5 |
87.7 |
|
| LJGI |
gnl|LJGI|BP054489 |
622 |
99.7 |
99.7 |
similar to UniRef100_A7NWB1 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape), partial (10%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v2374990.1 |
length: 106 aa. |
| IPR001910 |
Inosine/uridine-preferring nucleoside hydrolase domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:3.90.245.10 |
no description |
5.3e-13 |
38-105 |
| HMMPfam |
PF01156 |
IU_nuc_hydro |
1.2e-07 |
41-105 |
| superfamily |
SSF53590 |
Nucleoside |
1.4e-11 |
41-105 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
15-24 |
- Wolf-PSORT
Lj4g3v2374990.1 cyto 2.5, mito 2, plas 2, extr 2, vacu 2, E.R. 2, cyto_nucl 2, E.R._vacu 2, E.R._plas 2, mito_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v2374990.1 |
|