Miyakogusa Predicted Gene

Lj4g3v2374920.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL Q6EJC9_PUEML 1281 89.6 93.4 (tr|Q6EJC9) 1-deoxy-D-xylulose 5-phosphate synthase OS=Pueraria montana var. lobata GN=Dxs PE=2 SV=1
TAIR_pep AT4G15560.1 1187 86.4 92.4 | Symbols: CLA1, DEF, CLA, DXS, DXPS2 | Deoxyxylulose-5-phosphate synthase | chr4:8884218-8887254 FORWARD LENGTH=717
Medicago Medtr4g118640.1 1261 86.9 91.6 | 1-deoxy-D-xylulose-5-phosphate synthase | HC | chr4:49145064-49149426 | 20130731
Soybean Glyma17g02480.1 1261 88.8 93.1  
LJGI gnl|LJGI|TC75201 1108 99.8 99.8 homologue to UniRef100_Q6EJC9 Cluster: 1-deoxy-D-xylulose 5-phosphate synthase; n=1; Pueraria montana var. lobata|Rep: 1-deoxy-D-xylulose 5-phosphate synthase - Pueraria lobata (Kudzu vine), partial (20%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2374920.1 length: 704 aa.
IPR005474 Transketolase, N-terminal
method AccNumber shortName E-value location
PatternScan PS00801 TRANSKETOLASE_1 NA 96-115
IPR005475 Transketolase-like, pyrimidine-binding domain
HMMPfam PF02779 Transket_pyr 2.2e-43 393-554
HMMSmart SM00861 Transketolase, 9.7e-66 393-558
IPR005476 Transketolase, C-terminal
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
HMMPfam PF02780 Transketolase_C 7.1e-32 572-695
IPR005477 Deoxyxylulose-5-phosphate synthase
Molecular Function GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity    
Biological Process GO:0016114 terpenoid biosynthetic process    
HAMAP MF_00315 DXP_synth 41.823 70-704
HMMPfam PF13292 DXP_synthase_N 1.1e-108 71-356
HMMTigr TIGR00204 dxs: 5.3e-228 73-703
IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
superfamily SSF52922 TK 2e-34 566-704
IPR015941 Transketolase-like, C-terminal
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
Gene3D G3DSA:3.40.50.920 no description 3.2e-32 571-703
IPR020826 Transketolase binding site
PatternScan PS00802 TRANSKETOLASE_2 NA 499-515
no_ID  
Gene3D G3DSA:3.40.50.970 no description 1e-35 313-407
408-568
HMMPanther PTHR11624 DEHYDROGENASE 0 74-704
HMMPanther PTHR11624:SF20 1-DEOXYXYLULOSE-5-PHOSPHATE 0 74-704
Seg seg seg NA 308-320
superfamily SSF52518 Thiamin 7.9e-64 68-455
389-582
Wolf-PSORT
Lj4g3v2374920.1	chlo 8, cyto 3, nucl 1, mito 1, plas 1, nucl_plas 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2374920.1