Miyakogusa Predicted Gene

Lj4g3v2369420.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MJK6_SOYBN 596 70.7 76.0 (tr|K7MJK6) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G18550.1 405 53.6 64.9 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family protein | chr5:6160515-6162729 FORWARD LENGTH=465
Medicago Medtr4g119280.1 560 65.9 70.2 | zinc finger C-x8-C-x5-C-x3-H type protein | HC | chr4:49394887-49390580 | 20130731
Soybean Glyma17g02720.1 590 71.0 76.2  
LJGI gnl|LJGI|TC76104 2870 99.5 99.5 similar to UniRef100_A7NW62 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape), partial (74%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2369420.1 length: 489 aa.
IPR000571 Zinc finger, CCCH-type
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0008270 zinc ion binding    
Gene3D G3DSA:4.10.1000.10 no description 8.9e-05 51-72
95-117
HMMPfam PF00642 zf-CCCH 7.2e-08 47-72
93-117
139-163
310-335
357-380
HMMSmart SM00356 zinc 6.3e-06 45-72
90-117
136-163
308-335
354-381
ProfileScan PS50103 ZF_C3H1 14.943 45-73
90-118
136-164
308-336
354-382
no_ID  
HMMPanther PTHR12506 PROTEIN 4.5e-162 1-451
HMMPanther PTHR12506:SF11 ZINC 4.5e-162 1-451
Seg seg seg NA 172-189
243-255
383-394
413-417
432-453
458-489
superfamily SSF90229 CCCH 2.2e-05 40-79
131-170
349-388
85-124
303-336
Wolf-PSORT
Lj4g3v2369420.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2369420.1