Miyakogusa Predicted Gene

Lj4g3v2314750.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr4

Full length sequence(42341900 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL G7JLH6_MEDTR 380 46.2 56.4 (tr|G7JLH6) Translocase of chloroplast OS=Medicago truncatula GN=MTR_4g119910 PE=4 SV=1

TAIR_pep AT4G02510.1 79.7 36.3 52.7 | Symbols: TOC159, TOC86, PPI2, TOC160, ATTOC159 | translocon at the outer envelope membrane of chloroplasts 159 | chr4:1104766-1109360 FORWARD LENGTH=1503

Medicago Medtr4g119910.1 380 46.5 56.7 | 50S ribosome-binding GTPase | HC | chr4:49695339-49692130 | 20130731

Soybean Glyma17g02980.1 286 57.7 66.0

LJGI gnl|LJGI|BP063926 880 99.6 99.6 weakly similar to UniRef100_A6ZUH0 Cluster: Nuclear localization sequence binding protein; n=1; Saccharomyces cerevisiae YJM789|Rep: Nuclear localization sequence binding protein - Saccharomyces cerevisiae (strain YJM789) (Baker's yeast), partial (6%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj4g3v2314750.1 length: 703 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 30-57
71-89
149-165

Wolf-PSORT

Lj4g3v2314750.1 nucl 8, cyto 4, nucl_plas 4

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj4g3v2314750.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	G7JLH6_MEDTR	380	46.2	56.4	(tr\|G7JLH6) Translocase of chloroplast OS=Medicago truncatula GN=MTR_4g119910 PE=4 SV=1
TAIR_pep	AT4G02510.1	79.7	36.3	52.7	\| Symbols: TOC159, TOC86, PPI2, TOC160, ATTOC159 \| translocon at the outer envelope membrane of chloroplasts 159 \| chr4:1104766-1109360 FORWARD LENGTH=1503
Medicago	Medtr4g119910.1	380	46.5	56.7	\| 50S ribosome-binding GTPase \| HC \| chr4:49695339-49692130 \| 20130731
Soybean	Glyma17g02980.1	286	57.7	66.0
LJGI	gnl\|LJGI\|BP063926	880	99.6	99.6	weakly similar to UniRef100_A6ZUH0 Cluster: Nuclear localization sequence binding protein; n=1; Saccharomyces cerevisiae YJM789\|Rep: Nuclear localization sequence binding protein - Saccharomyces cerevisiae (strain YJM789) (Baker's yeast), partial (6%)

no_ID
Lj4g3v2314750.1				length: 703 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	30-57 71-89 149-165