| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | G7K983_MEDTR | 1251 | 78.4 | 87.4 | (tr|G7K983) Pentatricopeptide repeat-containing protein OS=Medicago truncatula GN=MTR_5g008840 PE=4 SV=1 |
| TAIR_pep | AT4G20770.1 | 767 | 48.6 | 69.5 | | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr4:11130762-11133086 REVERSE LENGTH=774 |
| Medicago | Medtr5g008840.1 | 1251 | 78.4 | 87.4 | | pentatricopeptide (PPR) repeat protein | HC | chr5:1959596-1956593 | 20130731 |
| Soybean | Glyma01g43790.1 | 1240 | 81.2 | 89.2 | |
| LJGI | gnl|LJGI|BW614398 | 880 | 100.0 | 100.0 | weakly similar to UniRef100_A7Q4W0 Cluster: Non-specific lipid-transfer protein; n=1; Vitis vinifera|Rep: Non-specific lipid-transfer protein - Vitis vinifera (Grape), partial (5%) |
| Lj4g3v2313700.1 | length: 778 aa. | |||
| IPR002885 | Pentatricopeptide repeat | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| HMMPfam | PF01535 | PPR | 0.00014 | 74-103 184-205 296-315 391-416 463-488 491-521 |
| HMMPfam | PF13041 | PPR_2 | 5.4e-11 | 209-258 322-370 589-636 |
| HMMPfam | PF13812 | PPR_3 | 0.00034 | 662-689 |
| HMMTigr | TIGR00756 | PPR: | 0.00046 | 74-103 212-245 324-357 391-423 491-524 592-625 665-691 |
| ProfileScan | PS51375 | PPR | 7.552 | 72-106 41-71 210-244 179-209 322-356 291-321 388-422 357-387 489-523 458-488 423-457 524-558 590-624 559-589 625-660 661-691 727-761 |
| IPR011990 | Tetratricopeptide-like helical | |||
| Molecular Function | GO:0005515 | protein binding | ||
| Gene3D | G3DSA:1.25.40.10 | no description | 2.2e-09 | 690-748 |
| no_ID | ||||
| HMMPanther | PTHR24015 | FAMILY | 2.9e-210 | 57-773 |
| HMMPanther | PTHR24015:SF102SUBFAMILY | NOT | 2.9e-210 | 57-773 |
Lj4g3v2313700.1 chlo 10, nucl 2, cyto 1, cysk 1, nucl_plas 1
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj4g3v2313700.1 |